Welcome to dreamBase!
dreamBase (DNA Modification, RNA Regulation and Protein Binding on Expressed Pseudogenes in Human Health and Disease) is an integrated platform for analysing regualtory features of pseudogenes from multi-dimensional high-throughput sequencing data.
Through combining predicted binding sites of microRNAs with AGO CLIP-seq data, we study the relevance of against RNA molecules of pseudogenes at post-transcriptional level. Besides, we combine these interaction and expression data of pseudogenes, and therefore construct consisted of pseudogenes and other RNAs.
Ground on CLIP-seq data, we provide thousands of binding sites of on pseudogenes. We also provide the transcriptome-wide profiling of on expressed pseudogenes based on epitranscriptome sequencing technologies. In addition, we provide a powerful to visualize the distributions of these high-throughput sequencing data on pseudogenes.
dreamBase: DNA modification, RNA regulation and protein binding of expressed pseudogenes in human health and disease. Zheng LL†*, Zhou KR†, Liu S, Zhang DY, Wang ZL, Chen ZR, Yang JH*, Qu LH*. Nucleic Acids Res. 2018 Jan 4;46(D1):D85-D91.