Information for 6-GCGCWYTACC (Motif 11)

T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C
Reverse Opposite:
A T C G A C T G A C G T G C T A C T A G G C T A A C T G T G A C C T A G A G T C
p-value:1e-99
log p-value:-2.302e+02
Information Content per bp:1.589
Number of Target Sequences with motif217.0
Percentage of Target Sequences with motif25.06%
Number of Background Sequences with motif1913.4
Percentage of Background Sequences with motif4.23%
Average Position of motif in Targets97.6 +/- 42.6bp
Average Position of motif in Background100.7 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.24
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0151.1_Pou6f1_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GCGCWYTACC---
NNNACCTCATTATCNTN
 A C G T A C G T A C G T A C G T T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C A C G T A C G T A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

POU6F2/MA0793.1/Jaspar

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGCWYTACC
AGCTCATTAT-
 A C G T T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T

POU6F1(var.2)/MA1549.1/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCGCWYTACC
NNCTCATTAT-
 A C G T T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C
G C T A A T G C T G A C C G A T T G A C G T C A A C G T A G C T C T G A G A C T A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:4
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GCGCWYTACC---
GCAACCTCATTATNNNN
 A C G T A C G T A C G T A C G T T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

LBX1/MA0618.1/Jaspar

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCGCWYTACC
-CTAATTAA-
 T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C
A C G T T A G C A G C T G C T A C T G A A C G T A C G T C T G A G C T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GCGCWYTACC
NSCACTYVAV-
 A C G T T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T

NOTO/MA0710.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GCGCWYTACC
GCTAATTAGC
 T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C
T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

PH0032.1_Evx2/Jaspar

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----GCGCWYTACC---
CACCGCTAATTAGCGGT
 A C G T A C G T A C G T A C G T T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C A C G T A C G T A C G T
A G T C T G C A G A T C G T A C T C A G A T G C A G C T T G C A C G T A A C G T A C G T C T G A A T C G A T G C A C T G A C G T G C A T

MEOX1/MA0661.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCGCWYTACC
GCTAATTAAC
 T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C
T C A G T A G C G A C T T G C A C G T A G A C T A C G T C T G A G T C A T A G C

BSX/MA0876.1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GCGCWYTACC
-CCAATTAA-
 T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C
A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T