Information for 4-ACCACTARRCCA (Motif 3)

G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A
Reverse Opposite:
A C G T C T A G A C T G A G T C G A T C A G C T C G T A C T A G A G C T A C T G A C T G A C G T
p-value:1e-211
log p-value:-4.861e+02
Information Content per bp:1.761
Number of Target Sequences with motif217.0
Percentage of Target Sequences with motif25.06%
Number of Background Sequences with motif536.1
Percentage of Background Sequences with motif1.19%
Average Position of motif in Targets101.8 +/- 35.1bp
Average Position of motif in Background99.8 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0004.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----ACCACTARRCCA-
CATAACCACTTAACAAC
 A C G T A C G T A C G T A C G T G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-ACCACTARRCCA
MRSCACTYAA---
 A C G T G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:3
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ACCACTARRCCA
ACCACTTGAA--
 G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:ACCACTARRCCA
NSCACTYVAV--
 G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ACCACTARRCCA-
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T A C G T G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

NKX2-2/MA1645.1/Jaspar

Match Rank:6
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACCACTARRCCA
TAACCACTCAAGAA
 A C G T A C G T G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A
G A C T G C T A C G T A T G A C G A T C G C T A G T A C G C A T A T G C G T C A T C G A T C A G G C T A G C T A

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-ACCACTARRCCA
AASCACTCAA---
 A C G T G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A
C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T A C G T A C G T

PPARA::RXRA/MA1148.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACCACTARRCCA---
NTGACCTTTGACCTANAT
 A C G T A C G T A C G T G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A A C G T A C G T A C G T
T G C A G A C T T C A G T G C A G T A C A G T C A G C T G A C T G A C T T C A G T G C A G A T C G T A C A G C T T G C A A G T C C G T A C G A T

KLF17/MA1514.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-ACCACTARRCCA--
CACCACGCACCCCTT
 A C G T G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A A C G T A C G T
G T A C G T C A T G A C T G A C G C T A G A T C T C A G G T A C C G T A T A G C T A G C G A T C T G A C G A C T G A C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACCACTARRCCA
TGACCTTTGCCCCA
 A C G T A C G T G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A