Information for 19-GTTGAYCTCG (Motif 30)

C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G
Reverse Opposite:
A T G C C A T G C T G A T C A G C T G A G A C T T G A C C G T A C T G A G T A C
p-value:1e-46
log p-value:-1.075e+02
Information Content per bp:1.616
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif11.78%
Number of Background Sequences with motif865.5
Percentage of Background Sequences with motif1.91%
Average Position of motif in Targets100.3 +/- 37.8bp
Average Position of motif in Background101.3 +/- 68.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GTTGAYCTCG-
-TTGAMCTTTG
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G A C G T
A C G T A G C T A G C T C A T G C T G A G T A C A G T C A G C T A G C T C A G T C T A G

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTGAYCTCG--
--TGACCTTGAT
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G A C G T A C G T
A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---GTTGAYCTCG----
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GTTGAYCTCG
--TGACCTYA
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:5
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GTTGAYCTCG--
--TGACCTTGAV
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G A C G T A C G T
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

ESRRA/MA0592.3/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTGAYCTCG---
NNTGACCTTGANN
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G A C G T A C G T A C G T
A G C T C T A G G A C T T C A G G C T A G T A C G T A C A G C T G A C T A T C G C T G A T C A G G T A C

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GTTGAYCTCG-
NATGACCTTGA
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G A C G T
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTTGAYCTCG-
-NTGACCTTGA
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G A C G T
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GTTGAYCTCG
--TGACCYCT
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

NR2C1/MA1535.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GTTGAYCTCG
-NTGACCTCN
 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G
A C G T C T A G A G C T A T C G G T C A A G T C G T A C A G C T G A T C C A T G