Information for 21-AGAGGTMG (Motif 36)

C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G
Reverse Opposite:
T A G C A C T G G C T A A T G C A G T C A C G T A G T C A C G T
p-value:1e-28
log p-value:-6.635e+01
Information Content per bp:1.742
Number of Target Sequences with motif103.0
Percentage of Target Sequences with motif11.89%
Number of Background Sequences with motif1447.6
Percentage of Background Sequences with motif3.20%
Average Position of motif in Targets107.5 +/- 41.1bp
Average Position of motif in Background96.6 +/- 66.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.33
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGTMG
TTGAGTGSTT-
 A C G T A C G T A C G T C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTMG-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.67
Offset:0
Orientation:forward strand
Alignment:AGAGGTMG
AGRGGTCA
 C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTMG
BTBRAGTGSN--
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G
A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGAGGTMG--
AGAGGAAGTG
 C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G A C G T A C G T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----AGAGGTMG
CTYRAGTGSY--
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G
A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C A C G T A C G T

SPI1/MA0080.5/Jaspar

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----AGAGGTMG-------
AAAAAAGAGGAAGTGAAAAA
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C T G A C T G A C G T A T C A G C T G A C T A G C T A G T C G A C G T A T C A G C G A T T A C G T C G A C T G A C T G A C T G A C G T A

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTMG----
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G

ZNF135/MA1587.1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---AGAGGTMG---
TCAGGAGGTCGAGG
 A C G T A C G T A C G T C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G A C G T A C G T A C G T
G A C T A G T C C T G A C T A G A T C G T C G A T C A G A T C G G A C T A G T C T C A G T C G A T C A G T C A G

COUP-TFII(NR)/K562-NR2F1-ChIP-Seq(Encode)/Homer

Match Rank:10
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AGAGGTMG
GKBCARAGGTCA
 A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G
T A C G A C T G A G C T G T A C C G T A T C G A C T G A A C T G C A T G A C G T A G T C C G T A