Expression Mean Normalization: (log2(FPKM)-Mean)  

References:

Cabili MN, Trapnell C, Goff L, Koziol M, Tazon-Vega B, Regev A, Rinn JL.. Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses. Genes Dev.2011 Sep 15;25(18):1915-27. [link to Pubmed]

  • Users can choose Clade, Species and Studies to see the result tables by changing the values in the select box and click the "Choose" button.

  • Here we use a "blue-white-red" heatmap table to show the expression value of lncRNAs in each dataset. The color scale are shown in corlor bar. The gene expression value are normalized by (log2(FPKM)-Mean).

  • Click the name or gene symbol of the lncRNA to see detailed expression analysis of selected genes.