Expression Mean Normalization: (log2(FPKM)-Mean)  

References:

Necsulea A,Soumillon M,Warnefors M,Liechti A,Daish T,Zeller U,Baker JC,Gr├╝tzner F,Kaessmann H. The evolution of lncRNA repertoires and expression patterns in tetrapods. Nature. 2014 Jan 30;505(7485):635-40. doi: 10.1038/nature12943. Epub 2014 Jan 19. [link to Pubmed]

  • Users can choose Clade, Species and Studies to see the result tables by changing the values in the select box and click the "Choose" button.

  • Here we use a "blue-white-red" heatmap table to show the expression value of protein coding genes in each dataset. The color scale are shown in corlor bar. The gene expression value are normalized by (log2(FPKM)-Mean).

  • Click the name or gene symbol of the mRNA to see detailed expression analysis of selected genes.