Expression Mean Normalization: (RPKM-Mean)  

References:

Faghihi MA,Zhang M,Huang J,Modarresi F,Van der Brug MP,Nalls MA,Cookson MR,St-Laurent G 3rd,Wahlestedt C. Evidence for natural antisense transcript-mediated inhibition of microRNA function. Genome Biol. 2010;11(5):R56. doi: 10.1186/gb-2010-11-5-r56. Epub 2010 May 27. [link to Pubmed]

  • Users can choose Clade, Species and Studies to see the result tables by changing the values in the select box and click the "Choose" button.

  • Here we use a "blue-white-red" heatmap table to show the expression value of small RNAs in each dataset. The color scale are shown in corlor bar. The gene expression value are normalized by (RPKM-Mean).

  • Click the name of the small RNA to see detailed expression analysis of selected genes.