Details of RNA Modification Site of hg38
mod ID m6A_site_106696 mod Site chr10:73911747-73911748:+
mod Type m6A Sequence GACTCTCCCCAGGAAATGGGACAGGGTGGCAGCGGAGGCTT
Motif Score 3.64304761904762
RNA Structure Motif ..((((.....))))................
 MFE -5.70
Support Dataset Num 4 Support sub-Dataset Num 13
Support Dataset List
Support sub-Dataset List

GSM1272364, GSM2283212, GSM2324292, GSM2324298, GSM2324308, GSM2464905, GSM2464907, GSM2464909, GSM2464911, GSM2464913, GSM2464921, GSM2464927, GSM2464931
Cell/Tissue List

H1B, Jurkat, peripheral-blood, endometrial, HEC-1-A
Seq Type List m6A-seq
Transcript ID List ENST00000494287.1,ENST00000446342.5,ENST00000372764.4,ENST00000481390.5
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000494287.1ENSG00000122861.16PLAUprocessed_transcriptintron-2
ENST00000446342.5ENSG00000122861.16PLAUprotein_codingutr5-2
ENST00000372764.4ENSG00000122861.16PLAUprotein_codingintron-2
ENST00000481390.5ENSG00000122861.16PLAUprotein_codingintron-2
Conserved Sites na
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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