Details of RNA Modification Site of hg38
mod ID m6A_site_135761 mod Site chr11:32391989-32391990:-
mod Type m6A Sequence ACCTGAAGACCCACACCAGGACTCATACAGGTAAAACAAGT
Motif Score 4.06504166666667
RNA Structure Motif .........(((.(........).)))....
 MFE -1.90
Support Dataset Num 1 Support sub-Dataset Num 2
Support Dataset List GSE93911
Support sub-Dataset List GSM2464907, GSM2464911
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000651533.1,ENST00000650745.1,ENST00000652579.1,ENST00000651819.1,ENST00000652724.1,ENST00000379079.7,ENST00000448076.8,ENST00000526685.2,ENST00000640146.2,ENST00000332351.8,ENST00000650861.1,ENST00000651459.1,ENST00000639907.2,ENST00000530998.5,ENST00000639563.2,ENST00000527882.5,ENST00000651668.1,ENST00000452863.8,ENST00000651794.1,ENST00000379077.8,ENST00000650986.1
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000651533.1ENSG00000184937.14WT1retained_intronexon-2
ENST00000650745.1ENSG00000184937.14WT1retained_intronexon-1
ENST00000652579.1ENSG00000184937.14WT1processed_transcriptexon-5
ENST00000651819.1ENSG00000184937.14WT1retained_intronexon-3
ENST00000652724.1ENSG00000184937.14WT1processed_transcriptexon-5
ENST00000379079.7ENSG00000184937.14WT1protein_codingcds-9
ENST00000448076.8ENSG00000184937.14WT1protein_codingcds-9
ENST00000526685.2ENSG00000184937.14WT1processed_transcriptexon-5
ENST00000640146.2ENSG00000184937.14WT1protein_codingcds-8
ENST00000332351.8ENSG00000184937.14WT1protein_codingcds-8
ENST00000650861.1ENSG00000184937.14WT1retained_intronexon-3
ENST00000651459.1ENSG00000184937.14WT1nonsense_mediated_decayutr3-3
ENST00000639907.2ENSG00000184937.14WT1retained_intronexon-4
ENST00000530998.5ENSG00000184937.14WT1protein_codingcds-8
ENST00000639563.2ENSG00000184937.14WT1protein_codingcds-8
ENST00000527882.5ENSG00000184937.14WT1protein_codingcds-5
ENST00000651668.1ENSG00000184937.14WT1processed_transcriptexon-4
ENST00000452863.8ENSG00000184937.14WT1protein_codingcds-9
ENST00000651794.1ENSG00000184937.14WT1retained_intronexon-5
ENST00000379077.8ENSG00000184937.14WT1nonsense_mediated_decayutr3-9
ENST00000650986.1ENSG00000184937.14WT1retained_intronexon-1
Conserved Sites mm10:m6A_site_347404
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID 30154548

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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