| mod ID | m6A_site_186454 | mod Site | chr12:49051300-49051301:- | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| mod Type | m6A | Sequence |
TTGTCCCCCCAGGCTGAGGGACCACATCTGTCCCCTCAGCC |
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| Motif Score | 3.62240476190476 | ||||||||||||
| RNA Structure Motif |
............(((((.......))))).. |
MFE | -7.00 | ||||||||||
| Support Dataset Num | 6 | Support sub-Dataset Num | 20 | ||||||||||
| Support Dataset List | |||||||||||||
| Support sub-Dataset List |
GSM2739502, GSM2739503, GSM2739522, GSM2884197, GSM2884199, GSM3396437, GSM908331, GSM1135020, GSM1135021, GSM1135032, GSM1135033, GSM2754211, GSM2754213, GSM2754220, GSM2754222, GSM2754226, GSM2754235, GSM2754237, GSM2754244, GSM2754246 |
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| Cell/Tissue List |
HeLa, CD34, HEK293T, HepG2, iSLK, MSC, TIME, TREX |
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| Seq Type List | m6A-seq,MeRIP-seq | ||||||||||||
| Transcript ID List | ENST00000301067.11 | ||||||||||||
| Transcript Detail |
|
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| Conserved Sites | rn6:m6A_site_94529 | ||||||||||||
| snoRNA Num | 0 | snoRNA Guide Site | na | ||||||||||
| snoRNA Guide Detail | na | ||||||||||||
| writer Num | 1 | Writer Name List | RBM15B | ||||||||||
| Writer Catalysis Detail |
|
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| PubMed ID |
♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.
♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.
♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.
♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.
♥ Click the "Show Detail" button to show detailed list and click again to hide it.
© 2023, Qu Lab.
School of Life Science,
Sun Yat-sen University, China.
Guangdong ICP 2022122093 -1