Details of RNA Modification Site of hg38
mod ID m6A_site_208138 mod Site chr12:110340873-110340874:+
mod Type m6A Sequence ACAGGCCGGGAGTTTGATGAACTCAACCCCTCCGCCCAGCG
Motif Score 3.37338095238095
RNA Structure Motif ...((((.((((.....))))...))))...
 MFE -6.40
Support Dataset Num 6 Support sub-Dataset Num 8
Support Dataset List
Support sub-Dataset List

GSM2739502, GSM2739503, GSM2884197, GSM2987447, GSM2987448, GSM908331, GSM2464911, GSM2602070
Cell/Tissue List

HeLa, CD34, HepG2, endometrial, AML
Seq Type List m6A-seq,miCLIP
Transcript ID List ENST00000548169.2,ENST00000539276.7,ENST00000308664.10,ENST00000377685.9
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000548169.2ENSG00000174437.17ATP2A2protein_codingcds-10
ENST00000539276.7ENSG00000174437.17ATP2A2protein_codingcds-14
ENST00000308664.10ENSG00000174437.17ATP2A2protein_codingcds-14
ENST00000377685.9ENSG00000174437.17ATP2A2nonsense_mediated_decayutr3-13
Conserved Sites na
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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