| mod ID | m6A_site_286184 | mod Site | chr15:72199467-72199468:- | ||||||||||||||||||||||||||||||||||||||||||||||||
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| mod Type | m6A | Sequence |
TTGCAGCCTGCTCTAGTGGGACAGCCCAGAGCCTGGCTGCC |
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| Motif Score | 3.64304761904762 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| RNA Structure Motif |
.((.(((((...(((....))))))))..)) |
MFE | -10.60 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Support Dataset Num | 13 | Support sub-Dataset Num | 27 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Support Dataset List | |||||||||||||||||||||||||||||||||||||||||||||||||||
| Support sub-Dataset List |
GSM2739535, GSM2991403, GSM2987447, GSM2987448, GSM3396437, GSE129842, GSM908331, GSM1272358, GSM1272360, GSM1272362, GSM1272366, GSM1272368, GSM1982257, GSM1982263, GSM2010454, GSM2010456, GSM2203051, GSM2324292, GSM2324298, GSM2324310, GSM2460360, GSM2460362, GSM2464905, GSM2464913, GSM2464919, GSM2464927, GSM2602071 |
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| Cell/Tissue List |
HeLa, HepG2, HEK293T, hESC-HEK293T, H1A, H1B, A549, H1299, MM6, Huh7, peripheral-blood, TREX, endometrial, HEC-1-A, AML |
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| Seq Type List | m6A-seq,MeRIP-seq,MAZTER-seq,miCLIP | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Transcript ID List | ENST00000568883.5,ENST00000319622.10,ENST00000389093.7,ENST00000565184.5,ENST00000567118.5,ENST00000449901.6,ENST00000565143.1,ENST00000564440.5,ENST00000335181.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||
| Transcript Detail |
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| Conserved Sites | na | ||||||||||||||||||||||||||||||||||||||||||||||||||
| snoRNA Num | 0 | snoRNA Guide Site | na | ||||||||||||||||||||||||||||||||||||||||||||||||
| snoRNA Guide Detail | na | ||||||||||||||||||||||||||||||||||||||||||||||||||
| writer Num | 1 | Writer Name List | RBM15 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Writer Catalysis Detail |
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| PubMed ID |
♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.
♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.
♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.
♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.
♥ Click the "Show Detail" button to show detailed list and click again to hide it.
© 2023, Qu Lab.
School of Life Science,
Sun Yat-sen University, China.
Guangdong ICP 2022122093 -1