Details of RNA Modification Site of hg38
mod ID m6A_site_316148 mod Site chr16:30067235-30067236:+
mod Type m6A Sequence TCTGTTTCCTGTATCCAGGAACTTGCTACTACCAGCACCAT
Motif Score 3.37338095238095
RNA Structure Motif ((((((....))))))...(((......)))
 MFE -6.60
Support Dataset Num 4 Support sub-Dataset Num 5
Support Dataset List
Support sub-Dataset List

GSM2739522, GSM908331, GSM1908206, GSM1908208, GSM1982257
Cell/Tissue List HeLa, HepG2, MT4, A549
Seq Type List m6A-seq,MeRIP-seq
Transcript ID List ENST00000395240.7,ENST00000562168.5,ENST00000627059.2,ENST00000566012.1,ENST00000412304.6,ENST00000566897.6,ENST00000568435.6,ENST00000566846.5,ENST00000569798.5,ENST00000563060.6,ENST00000338110.10,ENST00000563987.5,ENST00000564521.6,ENST00000564546.6,ENST00000567555.1,ENST00000569545.5,ENST00000564595.7,ENST00000562679.5,ENST00000643777.2,ENST00000395248.6,ENST00000642816.2
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000395240.7ENSG00000149925.19ALDOAprotein_codingutr5-2
ENST00000562168.5ENSG00000149925.19ALDOAprotein_codingutr5-3
ENST00000627059.2ENSG00000285043.1AC093512.2protein_codingutr5-7
ENST00000566012.1ENSG00000149925.19ALDOAprocessed_transcriptexon-2
ENST00000412304.6ENSG00000149925.19ALDOAprotein_codingutr5-2
ENST00000566897.6ENSG00000285043.1AC093512.2protein_codingutr3-5
ENST00000568435.6ENSG00000285043.1AC093512.2protein_codingutr3-6
ENST00000566846.5ENSG00000149925.19ALDOAprotein_codingutr5-2
ENST00000569798.5ENSG00000149925.19ALDOAprotein_codingutr5-2
ENST00000563060.6ENSG00000149925.19ALDOAprotein_codingutr5-2
ENST00000338110.10ENSG00000285043.1AC093512.2protein_codingutr3-7
ENST00000563987.5ENSG00000149925.19ALDOAprotein_codingutr5-3
ENST00000564521.6ENSG00000149925.19ALDOAretained_intronexon-2
ENST00000564546.6ENSG00000149925.19ALDOAprotein_codingutr5-2
ENST00000567555.1ENSG00000149925.19ALDOAretained_intronexon-2
ENST00000569545.5ENSG00000149925.19ALDOAprotein_codingutr5-4
ENST00000564595.7ENSG00000149925.19ALDOAprotein_codingcds-3
ENST00000562679.5ENSG00000149925.19ALDOAprotein_codingcds-3
ENST00000643777.2ENSG00000149925.19ALDOAprotein_codingutr5-2
ENST00000395248.6ENSG00000285043.1AC093512.2protein_codingutr3-9
ENST00000642816.2ENSG00000149925.19ALDOAprotein_codingcds-3
Conserved Sites na
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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