Details of RNA Modification Site of hg38
mod ID m6A_site_327166 mod Site chr16:68230031-68230032:-
mod Type m6A Sequence CCCCCAAAGACAATGGCTGGACCCTGCATGCAGGGCTGGGG
Motif Score 3.62240476190476
RNA Structure Motif ................(((((....))))).
 MFE -7.40
Support Dataset Num 9 Support sub-Dataset Num 19
Support Dataset List
Support sub-Dataset List

GSM3396437, GSM3396438, GSM3582048, GSM3582049, GSM928399, GSM928401, GSM908329, GSM908337, GSM1272358, GSM1272360, GSM1272362, GSM1272364, GSM1272366, GSM1272368, GSM1339395, GSM2417477, GSM2417478, GSM2417479, GSM2464931
Cell/Tissue List

HEK293T, HeLa, HepG2, H1A, H1B, hESCs, HEK293A-TOA, HEC-1-A
Seq Type List MeRIP-seq,m6A-seq
Transcript ID List ENST00000566774.1,ENST00000473183.6,ENST00000565858.5,ENST00000251366.7
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000566774.1ENSG00000103067.13ESRP2nonsense_mediated_decayutr3-9
ENST00000473183.6ENSG00000103067.13ESRP2protein_codingutr3-15
ENST00000565858.5ENSG00000103067.13ESRP2protein_codingutr3-15
ENST00000251366.7ENSG00000103067.13ESRP2retained_intronexon-13
Conserved Sites susScr11:m6A_site_105053
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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