Details of RNA Modification Site of hg38
mod ID m6A_site_362832 mod Site chr17:41867572-41867573:-
mod Type m6A Sequence AAACCAAGCCAATATTTGTGACTTTGCTCTGCTACCTGCTG
Motif Score 3.28175
RNA Structure Motif ...............................
 MFE 0.00
Support Dataset Num 2 Support sub-Dataset Num 3
Support Dataset List GSE125780, GSE71154
Support sub-Dataset List

GSM4024129, GSM1828594, GSM1828596
Cell/Tissue List HEK293T, CD8T, A549
Seq Type List DART-seq,m6A-CLIP/IP
Transcript ID List ENST00000352035.7,ENST00000590151.5,ENST00000353196.5,ENST00000537919.5
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000352035.7ENSG00000131473.17ACLYprotein_codingutr3-29
ENST00000590151.5ENSG00000131473.17ACLYprotein_codingutr3-29
ENST00000353196.5ENSG00000131473.17ACLYprotein_codingutr3-28
ENST00000537919.5ENSG00000131473.17ACLYprotein_codingutr3-21
Conserved Sites na
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID 31548708, 26404942

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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