Details of RNA Modification Site of hg38
mod ID m6A_site_389151 mod Site chr17:81847038-81847039:-
mod Type m6A Sequence TTTTTGGAGGTGAAATCAAGACTCACATCCTGCTGTTCTTG
Motif Score 3.31938095238095
RNA Structure Motif (((.((((.........)))).)))......
 MFE -6.50
Support Dataset Num 6 Support sub-Dataset Num 10
Support Dataset List
Support sub-Dataset List

GSM2739502, GSM2739503, GSM2884195, GSM2884197, GSM2884199, GSM2987447, GSM908331, GSM2464905, GSM2464913, GSM2564022
Cell/Tissue List

HeLa, CD34, HepG2, endometrial, MM6
Seq Type List m6A-seq
Transcript ID List ENST00000576390.5,ENST00000331483.9,ENST00000472244.5,ENST00000415593.5,ENST00000575069.5,ENST00000439918.6,ENST00000484286.1,ENST00000576380.5,ENST00000576052.1,ENST00000478034.5,ENST00000574007.5,ENST00000477607.6,ENST00000573778.6,ENST00000571617.1,ENST00000570907.5
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000576390.5ENSG00000185624.15P4HBprotein_codingintron-2
ENST00000331483.9ENSG00000185624.15P4HBprotein_codingcds-6
ENST00000472244.5ENSG00000185624.15P4HBprocessed_transcriptexon-5
ENST00000415593.5ENSG00000185624.15P4HBprotein_codingintron-1
ENST00000575069.5ENSG00000185624.15P4HBnonsense_mediated_decayutr3-6
ENST00000439918.6ENSG00000185624.15P4HBprotein_codingcds-5
ENST00000484286.1ENSG00000185624.15P4HBretained_intronexon-2
ENST00000576380.5ENSG00000185624.15P4HBprotein_codingcds-5
ENST00000576052.1ENSG00000185624.15P4HBprotein_codingcds-4
ENST00000478034.5ENSG00000185624.15P4HBretained_intronexon-3
ENST00000574007.5ENSG00000185624.15P4HBretained_intronexon-5
ENST00000477607.6ENSG00000185624.15P4HBretained_intronexon-4
ENST00000573778.6ENSG00000185624.15P4HBprotein_codingcds-5
ENST00000571617.1ENSG00000185624.15P4HBprotein_codingintron-2
ENST00000570907.5ENSG00000185624.15P4HBprotein_codingcds-3
Conserved Sites mm10:m6A_site_125902
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 1 Writer Name List RBM15B
Writer Catalysis Detail

Writer Name Writer ID Writer Binding Site Source
RBM15BRBM15B:CH95494chr17:81847024-81847044SBDH685-95494
PubMed ID

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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