Details of RNA Modification Site of hg38
mod ID m6A_site_400785 mod Site chr18:48072493-48072494:-
mod Type m6A Sequence GGCCCTCCTTCAGGAGTGGGACATGGGAAGGAGGCTGCAGA
Motif Score 3.64304761904762
RNA Structure Motif ((((((....(((...)))..))))))....
 MFE -7.40
Support Dataset Num 1 Support sub-Dataset Num 4
Support Dataset List GSE102493
Support sub-Dataset List

GSM2739522, GSM2739523, GSM2739534, GSM2739535
Cell/Tissue List HeLa
Seq Type List m6A-seq
Transcript ID List ENST00000588028.1,ENST00000585404.5,ENST00000588982.5,ENST00000586438.5,ENST00000588053.5,ENST00000589194.5,ENST00000588149.5,ENST00000590437.5,ENST00000591405.5,ENST00000589619.5,ENST00000593159.5,ENST00000587107.5,ENST00000591526.5,ENST00000586525.5,ENST00000589170.5,ENST00000592656.5,ENST00000590855.5,ENST00000591279.5,ENST00000586743.5,ENST00000588970.5,ENST00000590374.5,ENST00000588566.5,ENST00000535628.6,ENST00000586047.5,ENST00000590178.5,ENST00000590800.6,ENST00000592387.5,ENST00000589077.5
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000588028.1ENSG00000184828.10ZBTB7Cprotein_codingintron-5
ENST00000585404.5ENSG00000184828.10ZBTB7Cprotein_codingintron-4
ENST00000588982.5ENSG00000184828.10ZBTB7Cprotein_codingintron-2
ENST00000586438.5ENSG00000184828.10ZBTB7Cprotein_codingintron-1
ENST00000588053.5ENSG00000184828.10ZBTB7Cprotein_codingintron-5
ENST00000589194.5ENSG00000184828.10ZBTB7Cprotein_codingintron-5
ENST00000588149.5ENSG00000184828.10ZBTB7Cprotein_codingintron-4
ENST00000590437.5ENSG00000184828.10ZBTB7Cprotein_codingintron-2
ENST00000591405.5ENSG00000184828.10ZBTB7Cprotein_codingintron-3
ENST00000589619.5ENSG00000184828.10ZBTB7Cprotein_codingintron-4
ENST00000593159.5ENSG00000184828.10ZBTB7Cprotein_codingintron-5
ENST00000587107.5ENSG00000184828.10ZBTB7Cprotein_codingintron-5
ENST00000591526.5ENSG00000184828.10ZBTB7Cprotein_codingintron-5
ENST00000586525.5ENSG00000184828.10ZBTB7Cprotein_codingintron-3
ENST00000589170.5ENSG00000184828.10ZBTB7Cprotein_codingintron-8
ENST00000592656.5ENSG00000184828.10ZBTB7Cprotein_codingintron-5
ENST00000590855.5ENSG00000184828.10ZBTB7Cprotein_codingintron-4
ENST00000591279.5ENSG00000184828.10ZBTB7Cprotein_codingintron-3
ENST00000586743.5ENSG00000184828.10ZBTB7Cprotein_codingintron-4
ENST00000588970.5ENSG00000184828.10ZBTB7Cprotein_codingutr5-4
ENST00000590374.5ENSG00000184828.10ZBTB7Cprotein_codingintron-5
ENST00000588566.5ENSG00000184828.10ZBTB7Cprotein_codingintron-4
ENST00000535628.6ENSG00000184828.10ZBTB7Cprotein_codingintron-1
ENST00000586047.5ENSG00000184828.10ZBTB7Cprotein_codingintron-2
ENST00000590178.5ENSG00000184828.10ZBTB7Cprotein_codingintron-4
ENST00000590800.6ENSG00000184828.10ZBTB7Cprotein_codingintron-3
ENST00000592387.5ENSG00000184828.10ZBTB7Cprotein_codingintron-4
ENST00000589077.5ENSG00000184828.10ZBTB7Cprotein_codingintron-3
Conserved Sites na
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID 29507755

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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