Details of RNA Modification Site of hg38
mod ID m6A_site_503419 mod Site chr2:189051469-189051470:-
mod Type m6A Sequence TTATACTAGGGAGCTCCAGGACCTGCGGGACCCCTAGGGGA
Motif Score 3.62240476190476
RNA Structure Motif .(((((..((((((...))).)))..)))))
 MFE -11.70
Support Dataset Num 1 Support sub-Dataset Num 6
Support Dataset List GSE93911
Support sub-Dataset List

GSM2464905, GSM2464907, GSM2464909, GSM2464911, GSM2464913, GSM2464915
Cell/Tissue List endometrial
Seq Type List m6A-seq
Transcript ID List ENST00000374866.9,ENST00000649066.1,ENST00000618828.1
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000374866.9ENSG00000204262.13COL5A2protein_codingcds-42
ENST00000649066.1ENSG00000204262.13COL5A2protein_codingcds-42
ENST00000618828.1ENSG00000204262.13COL5A2protein_codingcds-35
Conserved Sites mm10:m6A_site_7598;susScr11:m6A_site_49009
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID 30154548

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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