Details of RNA Modification Site of hg38
mod ID m6A_site_533423 mod Site chr20:44987253-44987254:+
mod Type m6A Sequence ATTTTGCTAAATACAGAAGGACATGCAAAACTTGCAGATTT
Motif Score 3.64304761904762
RNA Structure Motif ..................(((((...)))))
 MFE -2.40
Support Dataset Num 3 Support sub-Dataset Num 5
Support Dataset List GSE102493, GSE125780, GSE129842
Support sub-Dataset List

GSM2739502, GSM2739503, GSM2991416, GSM4024128, GSE129842
Cell/Tissue List HeLa, HEK293T, hESC-HEK293T
Seq Type List m6A-seq,DART-seq,MAZTER-seq
Transcript ID List ENST00000372806.8,ENST00000372801.5,ENST00000499879.6,ENST00000474717.2
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000372806.8ENSG00000101109.12STK4protein_codingcds-5
ENST00000372801.5ENSG00000101109.12STK4protein_codingcds-5
ENST00000499879.6ENSG00000101109.12STK4protein_codingintron-4
ENST00000474717.2ENSG00000101109.12STK4protein_codingcds-5
Conserved Sites na
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID 29507755, 31548708, 31257032

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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