Details of RNA Modification Site of hg38
mod ID m6A_site_60724 mod Site chr1:160753931-160753932:+
mod Type m6A Sequence GAAGTGTGCATGGCCCAAGGACAAGGACCTCCAGCCAGGCT
Motif Score 3.64304761904762
RNA Structure Motif ......(((...(((.......)))...)))
 MFE -4.50
Support Dataset Num 8 Support sub-Dataset Num 16
Support Dataset List
Support sub-Dataset List

GSE129842, GSM1166139, GSM1166142, GSM1166143, GSM1166144, GSM1594131, GSM1723347, GSM1723349, GSM1723351, GSM1828594, GSM2283214, GSM2283215, GSM2460360, GSM2460362, GSM2754226, GSM2464911
Cell/Tissue List

hESC-HEK293T, U2OS, GM12878, LCLs, CD8T, CD4T, TREX, endometrial
Seq Type List MAZTER-seq,MeRIP-seq,m6A-seq,m6A-CLIP/IP
Transcript ID List ENST00000444090.6,ENST00000441662.6,ENST00000368042.7,ENST00000458104.6,ENST00000484221.1,ENST00000359331.8,ENST00000368043.8,ENST00000621377.4,ENST00000458602.6
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000444090.6ENSG00000026751.17SLAMF7protein_codingutr3-4
ENST00000441662.6ENSG00000026751.17SLAMF7protein_codingutr3-5
ENST00000368042.7ENSG00000026751.17SLAMF7protein_codingutr3-6
ENST00000458104.6ENSG00000026751.17SLAMF7protein_codingutr3-4
ENST00000484221.1ENSG00000026751.17SLAMF7retained_intronexon-2
ENST00000359331.8ENSG00000026751.17SLAMF7protein_codingutr3-6
ENST00000368043.8ENSG00000026751.17SLAMF7protein_codingutr3-7
ENST00000621377.4ENSG00000026751.17SLAMF7protein_codingutr3-6
ENST00000458602.6ENSG00000026751.17SLAMF7protein_codingutr3-5
Conserved Sites panTro5:m6A_site_4990
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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