Details of RNA Modification Site of hg38
mod ID m6A_site_735271 mod Site chr6:137197719-137197720:-
mod Type m6A Sequence GAGCAGGTGATGCCCCAGGGACCTTTGTAGCCACTTCACTT
Motif Score 3.62240476190476
RNA Structure Motif ((((..((..((((....))))..)))))).
 MFE -3.70
Support Dataset Num 9 Support sub-Dataset Num 14
Support Dataset List
Support sub-Dataset List

GSM2739506, GSM3396437, GSM3396438, GSM928399, GSM928401, GSM1135032, GSM1135033, GSM1339439, GSM1723347, GSM1723349, GSM1723351, GSM2203064, GSM2417478, GSM2460354
Cell/Tissue List

HeLa, HEK293T, A549, LCLs, Huh7, HEK293A-TOA, MSC
Seq Type List m6A-seq,MeRIP-seq
Transcript ID List ENST00000367739.8,ENST00000644894.1,ENST00000645045.1,ENST00000646898.1,ENST00000646036.1,ENST00000647124.1,ENST00000643119.1,ENST00000645753.1,ENST00000642390.1
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000367739.8ENSG00000027697.14IFNGR1protein_codingutr3-7
ENST00000644894.1ENSG00000027697.14IFNGR1protein_codingutr3-7
ENST00000645045.1ENSG00000027697.14IFNGR1nonsense_mediated_decayutr3-8
ENST00000646898.1ENSG00000027697.14IFNGR1protein_codingutr3-8
ENST00000646036.1ENSG00000027697.14IFNGR1protein_codingutr3-8
ENST00000647124.1ENSG00000027697.14IFNGR1protein_codingutr3-7
ENST00000643119.1ENSG00000027697.14IFNGR1nonsense_mediated_decayutr3-8
ENST00000645753.1ENSG00000027697.14IFNGR1protein_codingutr3-7
ENST00000642390.1ENSG00000027697.14IFNGR1protein_codingutr3-8
Conserved Sites panTro5:m6A_site_58256
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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