Details of RNA Modification Site of hg38
mod ID m6A_site_754111 mod Site chr7:36449796-36449797:+
mod Type m6A Sequence AAAGAGAAGATGACCGAGAGACTCTTGTCAGCCAATGCAGG
Motif Score 3.31938095238095
RNA Structure Motif .....((((.((((...))))))))......
 MFE -4.50
Support Dataset Num 2 Support sub-Dataset Num 2
Support Dataset List GSE102493, GSE74016
Support sub-Dataset List GSM2991416, GSM1908208
Cell/Tissue List HeLa, MT4
Seq Type List m6A-seq,MeRIP-seq
Transcript ID List ENST00000265748.7,ENST00000428612.5,ENST00000396068.6,ENST00000491782.1
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000265748.7ENSG00000011426.11ANLNprotein_codingcds-23
ENST00000428612.5ENSG00000011426.11ANLNprotein_codingcds-9
ENST00000396068.6ENSG00000011426.11ANLNprotein_codingcds-22
ENST00000491782.1ENSG00000011426.11ANLNretained_intronexon-1
Conserved Sites mm10:m6A_site_620392
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID 29507755, 27572442

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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