Details of RNA Modification Site of hg38
mod ID m6A_site_754166 mod Site chr7:36855195-36855196:-
mod Type m6A Sequence AGGAAAGCCAGCAGCCCCAGACTGCCCAAAAACTTGCCCAC
Motif Score 3.31938095238095
RNA Structure Motif .....((((.......))))...........
 MFE -3.70
Support Dataset Num 6 Support sub-Dataset Num 13
Support Dataset List
Support sub-Dataset List

GSM2884195, GSM2884197, GSM2884199, GSM1272362, GSM1272364, GSM1272366, GSM1272368, GSM1594131, GSM2203047, GSM2324298, GSM2324310, GSM2460360, GSM2460362
Cell/Tissue List

CD34, H1A, H1B, GM12878, Huh7, peripheral-blood, TREX
Seq Type List m6A-seq,MeRIP-seq
Transcript ID List ENST00000396045.7,ENST00000396040.6,ENST00000310758.8
Transcript Detail

Transcript ID Gene ID Gene Name Gene Type Region
ENST00000396045.7ENSG00000155849.15ELMO1protein_codingutr3-7
ENST00000396040.6ENSG00000155849.15ELMO1protein_codingutr3-7
ENST00000310758.8ENSG00000155849.15ELMO1protein_codingutr3-22
Conserved Sites na
snoRNA Num 0 snoRNA Guide Site na
snoRNA Guide Detail na
writer Num 0 Writer Name List na
Writer Catalysis Detail na
PubMed ID

♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.

♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.

♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.

♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.

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