| mod ID | RNA-editing_site_48284 | mod Site | chr16:12704650-12704651:- | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| mod Type | A-I | Sequence |
TCAGCAAGTCCACTCGGAAGAAGTTGGCAGACAAGTTCATC |
||||||||||||||||||
| Motif Score | noScore | ||||||||||||||||||||
| RNA Structure Motif |
..(((.((((....).))).)))........ |
MFE | -3.90 | ||||||||||||||||||
| Support Dataset Num | 2 | Support sub-Dataset Num | 2 | ||||||||||||||||||
| Support Dataset List | DARNED, RADAR | ||||||||||||||||||||
| Support sub-Dataset List | DARNED, RADAR | ||||||||||||||||||||
| Cell/Tissue List | na | ||||||||||||||||||||
| Seq Type List | na | ||||||||||||||||||||
| Transcript ID List | ENST00000381774.9,ENST00000433677.6,ENST00000261660.4 | ||||||||||||||||||||
| Transcript Detail |
|
||||||||||||||||||||
| Conserved Sites | na | ||||||||||||||||||||
| snoRNA Num | 0 | snoRNA Guide Site | na | ||||||||||||||||||
| snoRNA Guide Detail | na | ||||||||||||||||||||
| writer Num | 0 | Writer Name List | na | ||||||||||||||||||
| Writer Catalysis Detail | na | ||||||||||||||||||||
| PubMed ID | 19478186, 24163250 |
♥ There is a specific explanation when the mouse hover the logo in the upper right corner of each entry.
♥ The "modID" is unique ID among all modules and can be used to retrieve in all files of the RMBase v3.0 for more information.
♥ The "Motif score" is alignment score to evaluate the accuracy of identified motif regions of m6A. The higher of motif score means a more accurate motif and a more reliable modification site. The range is from 0 to 5.
♥ In "Transcript Detail", the "Gene Type" is gene biotypes including protein-coding genes (mRNAs), tRNAs, rRNAs, Mt-tRNAs, lincRNAs, pseudogenes etc.; While the "Region" is gene features including CDS, 3′-UTR, 5′-UTR, intron, exon and intergenic.
♥ Click the "Show Detail" button to show detailed list and click again to hide it.
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