Homer de novo Motif Results (GSM1160649.C57-BL6_POLR3D_ChIPseq_Rep1_summits_motifDir/)

Known Motif Enrichment Results
Gene Ontology Enrichment Results
If Homer is having trouble matching a motif to a known motif, try copy/pasting the matrix file into STAMP
More information on motif finding results: HOMER | Description of Results | Tips
Total target sequences = 866
Total background sequences = 45148
* - possible false positive
RankMotifP-valuelog P-pvalue% of Targets% of Background STD(Bg STD) Best Match/DetailsMotif File
1 A T G C A C T G C T A G C T A G C G A T A G C T A G T C T C A G T C G A C T G A A G T C G A T C 1e-309-7.134e+0228.18%0.67%29.1bp (78.3bp)PB0034.1_Irf4_1/Jaspar(0.635)
More Information | Similar Motifs Found		motif file (matrix)
2 G A C T T A C G A T G C C A G T T C A G C G A T T C G A T A C G A C T G T G A C C A T G A C G T 1e-214-4.940e+0211.78%0.04%43.3bp (39.4bp)ZBTB6/MA1581.1/Jaspar(0.597)
More Information | Similar Motifs Found		motif file (matrix)
3 G T C A A G T C A G T C T C G A A G T C A C G T T C G A C T A G C T A G A G T C A G T C C G T A 1e-211-4.861e+0225.06%1.19%35.1bp (62.1bp)PH0004.1_Nkx3-2/Jaspar(0.615)
More Information | Similar Motifs Found		motif file (matrix)
4 A G T C C G T A A G T C A G T C A G T C A C T G A C T G A C G T C G T A A C G T 1e-147-3.398e+025.66%0.00%45.4bp (17.4bp)ETS2/MA1484.1/Jaspar(0.607)
More Information | Similar Motifs Found		motif file (matrix)
5 C G T A A G T C C G T A A C T G C G T A A C T G A C T G A C T G A C T G C G T A A C T G A C G T 1e-144-3.319e+025.54%0.00%44.9bp (17.4bp)ZIC1/MA0696.1/Jaspar(0.665)
More Information | Similar Motifs Found		motif file (matrix)
6 A C T G C G T A A C G T A G T C C G T A A G T C A C T G C G T A A C T G A C G T 1e-120-2.772e+024.73%0.00%27.7bp (0.0bp)TFE3/MA0831.2/Jaspar(0.730)
More Information | Similar Motifs Found		motif file (matrix)
7 A G T C A G T C A C T G A C T G A C G T C G T A A C T G A C T G C G T A A C G T 1e-115-2.656e+025.31%0.01%27.0bp (46.0bp)PB0181.1_Spdef_2/Jaspar(0.665)
More Information | Similar Motifs Found		motif file (matrix)
8 C G T A A C T G A C G T A G T C A G T C C G T A C G T A C G T A C G T A C G T A 1e-106-2.460e+025.54%0.01%44.9bp (45.3bp)PB0134.1_Hnf4a_2/Jaspar(0.713)
More Information | Similar Motifs Found		motif file (matrix)
9 A C G T A G T C C T A G T A G C C G T A C G A T A C T G A G T C A C G T C G T A C T G A A C T G 1e-105-2.438e+025.89%0.02%20.5bp (78.2bp)Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer(0.641)
More Information | Similar Motifs Found		motif file (matrix)
10 C T A G A C G T C T A G A C T G A G T C A C G T A G T C C G T A 1e-104-2.406e+0229.91%6.02%42.3bp (62.4bp)FOS::JUND/MA1141.1/Jaspar(0.732)
More Information | Similar Motifs Found		motif file (matrix)
11 T C A G G A T C A C T G T G A C C G A T A G T C C G A T G T C A T G A C A T G C 1e-99-2.302e+0225.06%4.23%42.6bp (68.7bp)PH0151.1_Pou6f1_1/Jaspar(0.604)
More Information | Similar Motifs Found		motif file (matrix)
12 C G T A A C T G A C G T C T G A A G T C A C G T C G T A C G T A A G T C A G T C 1e-97-2.254e+027.04%0.07%22.1bp (87.3bp)SD0001.1_at_AC_acceptor/Jaspar(0.638)
More Information | Similar Motifs Found		motif file (matrix)
13 A C G T C G T A A G T C A C G T A C G T A C T G A C T G C G T A A C G T A C T G A C T G A C T G 1e-91-2.104e+025.31%0.02%30.3bp (128.4bp)PB0167.1_Sox13_2/Jaspar(0.635)
More Information | Similar Motifs Found		motif file (matrix)
14 A G T C A G T C C G T A A G T C A G T C A G T C A C G T A C T G C G T A C G T A A G T C A C T G 1e-91-2.096e+025.20%0.02%19.1bp (26.6bp)PB0167.1_Sox13_2/Jaspar(0.616)
More Information | Similar Motifs Found		motif file (matrix)
15 C A G T A C T G A C T G A T G C G T A C A C T G C A G T C T A G A C T G G T A C T A G C C T A G 1e-90-2.094e+025.77%0.04%49.5bp (53.2bp)Klf12/MA0742.1/Jaspar(0.715)
More Information | Similar Motifs Found		motif file (matrix)
16 A C G T A C T G A C T G A C T G A T G C A C G T C G T A A G T C C G T A A G T C C G T A A C G T 1e-89-2.071e+024.04%0.01%43.6bp (25.0bp)PB0117.1_Eomes_2/Jaspar(0.612)
More Information | Similar Motifs Found		motif file (matrix)
17 C G T A A C T G A C T G A C T G C G A T A G T C A C T G A C T G A C T G A G T C A G T C A C G T 1e-87-2.006e+025.20%0.02%21.1bp (107.6bp)KLF1(Zf)/HUDEP2-KLF1-CutnRun(GSE136251)/Homer(0.676)
More Information | Similar Motifs Found		motif file (matrix)
18 A C G T C G T A A G T C A C T G A C T G A G T C A G T C C G T A A C G T C G T A 1e-86-1.993e+025.08%0.02%20.7bp (16.3bp)PB0143.1_Klf7_2/Jaspar(0.633)
More Information | Similar Motifs Found		motif file (matrix)
19 C G T A A G T C A C T G C G T A A C T G C T G A A C G T A G T C A C T G A C T G A C T G A G T C 1e-83-1.928e+024.85%0.02%20.5bp (46.6bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.629)
More Information | Similar Motifs Found		motif file (matrix)
20 A C T G A C T G A G T C A C T G A G T C A G T C A C T G C G T A A G T C C G T A C G T A A C T G 1e-81-1.873e+024.73%0.02%15.8bp (33.3bp)PB0112.1_E2F2_2/Jaspar(0.669)
More Information | Similar Motifs Found		motif file (matrix)
21 G C T A G A C T A G T C C T G A C T A G T C G A C G A T C T A G C T A G C G A T C G A T A C T G 1e-80-1.859e+0213.39%1.18%47.8bp (59.5bp)TAL1::TCF3/MA0091.1/Jaspar(0.784)
More Information | Similar Motifs Found		motif file (matrix)
22 C G T A C G T A C G T A A C T G A C T G A C T G C G T A A C T G C G T A A C T G C G T A A C T G 1e-77-1.774e+024.85%0.03%46.5bp (71.1bp)PRDM1/MA0508.3/Jaspar(0.618)
More Information | Similar Motifs Found		motif file (matrix)
23 G A C T T A C G C T G A A T C G G A C T A C T G A G T C C G A T A G T C A G C T A G C T G T C A 1e-75-1.742e+0210.39%0.64%30.1bp (61.0bp)PB0099.1_Zfp691_1/Jaspar(0.689)
More Information | Similar Motifs Found		motif file (matrix)
24 C T A G C T A G G T C A C T G A A C T G C T G A C G T A T A G C A C T G C G T A A C G T T G A C 1e-73-1.692e+026.35%0.12%26.9bp (55.9bp)ZNF263/MA0528.2/Jaspar(0.601)
More Information | Similar Motifs Found		motif file (matrix)
25 A G T C A G T C A G T C A G T C C G T A C G T A A C T G C G T A A C T G A G T C A G T C A C G T 1e-71-1.651e+024.50%0.03%28.4bp (50.4bp)ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer(0.624)
More Information | Similar Motifs Found		motif file (matrix)
26 A G T C C T G A C T A G A G T C C G T A C G T A A G T C A T G C C G T A A G T C 1e-67-1.554e+0210.74%0.87%41.2bp (63.8bp)ZBTB7C/MA0695.1/Jaspar(0.693)
More Information | Similar Motifs Found		motif file (matrix)
27 A T C G C A T G C T A G A G T C C G A T A C T G C T A G G A T C A T C G G T C A C T A G C G T A 1e-66-1.538e+0212.01%1.21%42.7bp (60.7bp)KLF15/MA1513.1/Jaspar(0.630)
More Information | Similar Motifs Found		motif file (matrix)
28 A C G T C G T A C G T A A G T C A G T C C T A G A G T C A C G T G T C A A C T G 1e-48-1.109e+023.46%0.04%27.1bp (56.3bp)RUNX2/MA0511.2/Jaspar(0.725)
More Information | Similar Motifs Found		motif file (matrix)
29 A G C T A C T G A G T C A G T C A G T C G A T C C G A T A T G C A G T C A G T C A G T C A G T C 1e-48-1.106e+0213.74%2.60%43.0bp (56.0bp)ZNF148/MA1653.1/Jaspar(0.925)
More Information | Similar Motifs Found		motif file (matrix)
30 C A T G G A C T A C G T A C T G C T G A G A C T A G T C G A C T G T A C A T C G 1e-46-1.075e+0211.78%1.91%37.8bp (68.0bp)RARa(NR)/K562-RARa-ChIP-Seq(Encode)/Homer(0.701)
More Information | Similar Motifs Found		motif file (matrix)
31 A G T C A G T C C T G A A C G T C G T A A G T C A G T C C G T A 1e-40-9.316e+016.24%0.48%23.2bp (60.4bp)PB0098.1_Zfp410_1/Jaspar(0.726)
More Information | Similar Motifs Found		motif file (matrix)
32 A C T G A C T G A C G T C G T A A C T G C G T A A C T G A G T C C G T A A C G T 1e-39-9.062e+012.77%0.03%25.4bp (58.3bp)ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer(0.666)
More Information | Similar Motifs Found		motif file (matrix)
33 A T G C A C G T A C T G A C G T A C G T A C G T C G T A A G T C 1e-35-8.245e+019.58%1.67%36.4bp (68.2bp)Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer(0.986)
More Information | Similar Motifs Found		motif file (matrix)
34 A C T G A C T G C G T A A C T G A G T C A C T G A C T G C G T A A C T G A C T G A C T G A C G T 1e-33-7.700e+011.73%0.01%37.9bp (42.4bp)ZIC5/MA1584.1/Jaspar(0.646)
More Information | Similar Motifs Found		motif file (matrix)
35 C G T A A C T G C G T A G T A C A T G C C T A G A G T C A T G C 1e-30-7.087e+014.97%0.42%16.0bp (82.8bp)PB0196.1_Zbtb7b_2/Jaspar(0.744)
More Information | Similar Motifs Found		motif file (matrix)
36 C G T A A C T G G T C A A C T G T A C G C G A T G T A C A T C G 1e-28-6.635e+0111.89%3.20%41.1bp (66.3bp)Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer(0.691)
More Information | Similar Motifs Found		motif file (matrix)
37 * T A C G A G T C C T G A T A C G C T G A T C A G T A C G G A T C C T A G A T C G T G C A T C A G 1e-3-8.130e+001.62%0.53%53.4bp (49.0bp)ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer(0.613)
More Information | Similar Motifs Found		motif file (matrix)