Here, we presented the miRNA-target interactions by intersecting the predicting target sites of miRNAs with binding sites of Ago protein, which were derived from CLIP-seq data.
We also introduced a new algorithm called TDMDScore to systematically scan the miRNA-target interactions and evaluated the potential interactions that triggered target-directed microRNA degradation (TDMD).
A higher TDMDScore indicates that the miRNA-target is more likely to trigger the TDMD.
The interactions of miRNA-circRNA were predicted by using miRanda program.
Select the miRNA: all
Select the target: CDR1as
Refine results with high stringency of CLIP Data: 3
Users can filter the results by searching in the table. The searchable columns are allowed using comparison operators like ">=", "<=", ">", "<" and "=". The ">=" is set by default.