Description:

Here, we presented the miRNA-target interactions by intersecting the predicting target sites of miRNAs with binding sites of Ago protein, which were derived from CLIP-seq data.

We also introduced a new algorithm called TDMDScore to systematically scan the miRNA-target interactions and evaluated the potential interactions that triggered target-directed microRNA degradation (TDMD).

A higher TDMDScore indicates that the miRNA-target is more likely to trigger the TDMD.

The interactions of miRNA-pseudogene were predicted by using miRanda program.

Usage:

Select the miRNA: all
Select the target: SKP1P1
Refine results with high stringency of CLIP Data: 3
Explore the interaction of miRNA-pseudogene with Pan-Cancer analysis: 5
Users can filter the results by searching in the table. The searchable columns are allowed using comparison operators like ">=", "<=", ">", "<" and "=". The ">=" is set by default.